CDS

Accession Number TCMCG051C19222
gbkey CDS
Protein Id XP_024458375.1
Location join(2792028..2792176,2792468..2792612,2792718..2792798,2792927..2793040,2793571..2793627,2793931..2794032,2794408..2794558,2794907..2794983,2795246..2795356,2796096..2796166,2796346..2796487,2796921..2797019,2797138..2797266,2797412..2797526,2798142..2798209,2798487..2798600,2798709..2798825,2798922..2798969)
Gene LOC7496079
GeneID 7496079
Organism Populus trichocarpa

Protein

Length 629aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024602607.1
Definition DNA gyrase subunit B, chloroplastic/mitochondrial [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category B
Description A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K02470        [VIEW IN KEGG]
EC 5.99.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0003918        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006265        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009295        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0061505        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCGTCTTCTTCTAAAACCTCACAACAGCAGTAGACACTGCATCTCTTTACTCAGAGCTACCATGACCTCCTCCTCCTCTTCTTCTGTTACTTGGTCTCACTCATTCTCTTCTCTCTCCCGCCCCTTAGTCTCCTTCAAGCCAAGGGTGAGTTTCCCATTGAGGACGGTTCCAAGTAGATTTTTGGTGCAAAATGGGGTCTCACCAAGAGCTTTAATGTCTACCAGTGCAGCAACTGAATCACAGAAAGAAAGCGCGAGCTCGAAAGCTTATGGGTCTGATCAAATTCAGGTGTTGAAAGGATTAGAGCCTGTAAGGAAAAGGCCAGGGATGTATATTGGAAGTACGGGACCGCGTGGTCTGCACCATTTGGTGTATGAGATATTAGATAATGCTGTTGATGAGGCCCAAGCAGGATATGCTTCAAAGATAAATGTTGTTCTGCATTCGGATAATTCCATTAGCATTACTGACAATGGGCGTGGGATTCCCACTGACTTGCATCAGGTGACAAAGAAATCTGCCCTGGAGACTGTGTTAACGGTCTTACATGCTGGCGGCAAATTTGGTGGTTCTAACAGTGGATATAGTGTCTCTGGTGGGCTACATGGTGTGGGTTTATCTGTTGTCAATGCTTTGTCTGAGGAACTAGAAGTTACAGTTTGGCGTGATGGAAAGGAGTACCAGCAGAAATATTCTCGTGGAAACCCTGTGACAACTCTAATGTGTTATGAACTTTCAGCAGAATCGAAAGACCAAAAAGGGACTCGCATCAGATTCTGGCCTGACAAAGAAGTATTCACCACTGAGATTCAGTTTGACTACAACACAGTAGGTGGACGGGTTAGGGAGCTTGCATTTTTGAACCCAAAGCTTGCTATTTCATTGAAAAAAGAGGACAATGATCCGGAGAAGAATCAGTATGATGAACATTTCTATGCAGGTGGATTGATTGAATATGTGAATTGGCTAAATACTGATAAGAAATCGCTTCATGATGTTGTGAGTTTCAGAAAAGAAGTAGATGGAATTGCAATTGATATGGCTCTCCAATGGTGTTCTGATGCTTACTCAGATACAATCCTGGGATATGCTAATAGCATACGTACTGTTGATGGTGGAACCCATATAGATGGGGTGAAGGCTTCATTGACAAGAACTCTCAATAACTTTGGGAAAAAGTCAAAAGTCATTAAGGATAAGGATATTAGTTTAAGCGGTGAACATGTAAGGGAGGGATTGACATGCATTATCTCAGTCAAAGTTCCAAGCCCAGAATTTGAAGGTCAGACAAAGACAAGGTTGGGAAATCCGGAGGTGCGGAAAGTGGTAGAGCAATCTGTCCAGGAGTATCTTACTGAATATTTGGAGTTGCATCCTGATGTTCTTGATTCAATCTTATCAAAGTCTCTAAATGCTCTCAAGGCAGCTTTGGCAGCAAAGAGGGCAAGAGAATTGGTGAGACAAAAAAGTGTTTTGAAATCATCATCTCTTCCAGGAAAACTGGCTGATTGCTCATCTACAGATCCTGAAGAATCTGAAATTTTTATAGTTGAAGGAGATTCAGCTGGAGGGAGTGCCAAACAAGGCCGTGATCGACGCTTTCAGGCTATTCTCCCTTTGAGGGGTAAAATTCTGAATATAGAAAGAAGAGATGAGGAGGCAATGTACAAAAATGAAGAGATCCAAAATCTTATACTTGCCCTTGGACTTGGAGTGAAGGGAGAGGATTTTAAAAAAGATGCTCTTCGTTATCATAGGATCATCATCTTAACAGATGCTGATGTGGACGGTGCTCACATCCGAACTCTTCTGCTGACTTTCTTCTTTAGATATCAGGAGAGATGTACAATTATGGAAACCTTCTGTGCAGAGAGCTTTATTTGA
Protein:  
MARLLLKPHNSSRHCISLLRATMTSSSSSSVTWSHSFSSLSRPLVSFKPRVSFPLRTVPSRFLVQNGVSPRALMSTSAATESQKESASSKAYGSDQIQVLKGLEPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASKINVVLHSDNSISITDNGRGIPTDLHQVTKKSALETVLTVLHAGGKFGGSNSGYSVSGGLHGVGLSVVNALSEELEVTVWRDGKEYQQKYSRGNPVTTLMCYELSAESKDQKGTRIRFWPDKEVFTTEIQFDYNTVGGRVRELAFLNPKLAISLKKEDNDPEKNQYDEHFYAGGLIEYVNWLNTDKKSLHDVVSFRKEVDGIAIDMALQWCSDAYSDTILGYANSIRTVDGGTHIDGVKASLTRTLNNFGKKSKVIKDKDISLSGEHVREGLTCIISVKVPSPEFEGQTKTRLGNPEVRKVVEQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAKRARELVRQKSVLKSSSLPGKLADCSSTDPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEEAMYKNEEIQNLILALGLGVKGEDFKKDALRYHRIIILTDADVDGAHIRTLLLTFFFRYQERCTIMETFCAESFI